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HPLC Analysis

TL;DR

Reversed-phase HPLC with UV detection at 214 nm is the primary method for peptide purity determination. A C18 column with 0.1% TFA in water/acetonitrile gradient is the standard configuration.

Principle

Reversed-phase HPLC separates peptide components based on hydrophobicity. The peptide elutes as a peak, and purity is calculated as the area percentage of the main peak relative to all detected peaks.


What Are the Standard HPLC Method Parameters?

Parameter Typical Value
Column C18, 4.6 × 250 mm, 5 μm
Mobile phase A 0.05–0.1% TFA in water
Mobile phase B 0.05–0.1% TFA in acetonitrile
Gradient 5–60% B over 20–40 min
Flow rate 1.0 mL/min
Detection UV 214 nm
Temperature 25 °C
Injection 10–50 μL

Purity Calculation

% Purity = (Area of main peak / Total area of all peaks) × 100

Acceptance Criteria

Grade Minimum Purity
Crude — (baseline)
Research ≥95%
Purified ≥98%
GMP ≥98% (per COA spec)

Interpreting a Chromatogram

  • Main peak: Target peptide
  • Earlier eluting peaks: Typically deletion sequences (shorter)
  • Later eluting peaks: Truncated peptides or hydrophobic impurities
  • Baseline separation: Indicates good resolution

  • Purity analysis
  • Impurity profiling
  • Method validation

  • Peptide Purity Determination — Review the section above for key parameters, methods, and quality criteria.

  • What Are the Standard HPLC Method Parameters? — See the section for detailed parameters and specifications.
  • Purity Calculation — Review the section above for key parameters, methods, and quality criteria.
  • Interpreting a Chromatogram — Review the section above for key parameters, methods, and quality criteria.

🔗 Related: Analytical HPLC System | Purity Analysis | LC-MS Testing | Peptide Quality Control Guide


Key Takeaways

  • What Are the Standard HPLC Method Parameters? — See the section above for detailed parameters and specifications.
  • Purity Calculation — Review the section above for key parameters, methods, and quality criteria.
  • Interpreting a Chromatogram — Review the section above for key parameters, methods, and quality criteria.